…at) (#2503)

* CompatHelper: bump compat for AdvancedHMC to 0.7, (keep existing compat)

* Relax two test tolerances a bit

* Adjust some tolerances and sample counts in tests

* Adjust more test sample counts

---------

Co-authored-by: CompatHelper Julia <compathelper_noreply@julialang.org>
Co-authored-by: Markus Hauru <mhauru@turing.ac.uk>

* Bump minor version to v0.37

* Remove selector/space stuff (#2458)

* Remove selector stuff from ESS

* Remove selector stuff from MH

* Remove selector stuff from HMC

* Remove selector stuff from Emcee

* Remove selector stuff from IS

* Add missing getspace methods

* Remove selector stuff for particle methods

* Fix an HMC selector bug

* Code style

* Fix Emcee selector bug

* Fix typo in ESS tests

* Fix some constructor overwrites

* Remove unnecessary tests

* Remove selector stuff from SGHMC

* Remove drop_space and other non-longer-necessary deprecation measures

* Bump minor version 0.37. Add a HISTORY.md entry

* Apply suggestions from code review

Co-authored-by: Penelope Yong <penelopeysm@gmail.com>

* Remove unnecessary type parameters

Co-authored-by: Penelope Yong <penelopeysm@gmail.com>

* Simplify constructors in particle_mcmc.jl

* Remove calls to setgid and updategid

---------

Co-authored-by: Penelope Yong <penelopeysm@gmail.com>

* Bump Mooncake compat to 0.4.95

* Support for DynamicPPL v0.35 (#2488)

* Progress towards compat with DPPL v0.35

* More fixing of DPPL v0.35 stuff

* Fix LogDensityFunction argument order

* More minor bugfixes

* [TEMP] Commit Manifest pointing to DynamicPPL#release-0.35

* remove LogDensityProblemsAD (#2490)

* Remove LogDensityProblemsAD, part 1

* update Optimisation code to not use LogDensityProblemsAD

* Fix field name change

* Don't put chunksize=0

* Remove LogDensityProblemsAD dep

* Improve OptimLogDensity docstring

* Remove unneeded model argument to _optimize

* Fix more tests

* Remove essential/ad from the list of CI groups

* Fix HMC function

* more test fixes (#2491)

* Remove LogDensityProblemsAD, part 1

* update Optimisation code to not use LogDensityProblemsAD

* Fix field name change

* Don't put chunksize=0

* Remove LogDensityProblemsAD dep

* Improve OptimLogDensity docstring

* Remove unneeded model argument to _optimize

* Fix more tests

* Remove essential/ad from the list of CI groups

* Fix HMC function

* More test fixes

* Remove Manifest

* More fixes for DynamicPPL 0.35 (#2494)

* Remove test/dynamicppl/compiler.jl

* Remove old regression tests

* Remove vdemo2

* Fix last test

* Add HISTORY.md entry about DPPL 0.35

* Allow ESS to sample variables with different symbols

* Update a TODO note

---------

Co-authored-by: Penelope Yong <penelopeysm@gmail.com>

* Fix call to DynamicPPL.initialize_parameters!!

* Remove `Zygote` (#2505)

* Remove `Zygote`; fix #2504

* Update test/test_utils/ad_utils.jl

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>

* Add HISTORY.md entry about removing support for Zygote

---------

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: Markus Hauru <mhauru@turing.ac.uk>
Co-authored-by: Penelope Yong <penelopeysm@gmail.com>
Co-authored-by: Markus Hauru <markus@mhauru.org>

* Fix a Gibbs test

* Clean up exports (#2474)

* Regroup exports by package

* Export DynamicPPL.returned and DynamicPPL.prefix

* Stop exporting  @logprob_str and @prob_str

* Remove DynamicPPL module export

* Remove DynamicPPL.LogDensityFunction re-export

* Remove BernoulliLogit, drop support for Distributions < 0.25.77

* Stop blanket re-exporting Libtask and Bijectors

* Manually specify AbstractMCMC exports

* Format

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>

* Remove Bijectors.ordered export

* Re-export LinearAlgebra.I

* Replace Turing.Model -> DynamicPPL.Model

* Format

* Keep exporting LogDensityFunction

* Add note in docs

* Align Turing exports with docs API page

* Fix things like `predict` on docs API page

* Fix a Gibbs test

* Format

* Fix missing Bijectors import

* Update docs/src/api.md

Co-authored-by: Markus Hauru <markus@mhauru.org>

* Update docs/src/api.md

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>

* Clean up broken docs links, remove unneeded deps

* Format

* Add changelog entry for exports

* Clean up exports in essential/Essential

* Apply suggestions from code review

Co-authored-by: Markus Hauru <markus@mhauru.org>

---------

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: Markus Hauru <mhauru@turing.ac.uk>
Co-authored-by: Markus Hauru <markus@mhauru.org>

---------

Co-authored-by: Penelope Yong <penelopeysm@gmail.com>
Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com>
Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>