Release v0.37 #2487
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Release v0.37 #2487
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* Remove selector stuff from ESS * Remove selector stuff from MH * Remove selector stuff from HMC * Remove selector stuff from Emcee * Remove selector stuff from IS * Add missing getspace methods * Remove selector stuff for particle methods * Fix an HMC selector bug * Code style * Fix Emcee selector bug * Fix typo in ESS tests * Fix some constructor overwrites * Remove unnecessary tests * Remove selector stuff from SGHMC * Remove drop_space and other non-longer-necessary deprecation measures * Bump minor version 0.37. Add a HISTORY.md entry * Apply suggestions from code review Co-authored-by: Penelope Yong <penelopeysm@gmail.com> * Remove unnecessary type parameters Co-authored-by: Penelope Yong <penelopeysm@gmail.com> * Simplify constructors in particle_mcmc.jl * Remove calls to setgid and updategid --------- Co-authored-by: Penelope Yong <penelopeysm@gmail.com>
Codecov ReportAttention: Patch coverage is
Additional details and impacted files@@ Coverage Diff @@
## main #2487 +/- ##
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+ Coverage 84.88% 86.03% +1.14%
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Files 21 21
Lines 1628 1454 -174
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- Hits 1382 1251 -131
+ Misses 246 203 -43 ☔ View full report in Codecov by Sentry. 🚀 New features to boost your workflow:
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Pull Request Test Coverage Report for Build 13930147191Details
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* Progress towards compat with DPPL v0.35 * More fixing of DPPL v0.35 stuff * Fix LogDensityFunction argument order * More minor bugfixes * [TEMP] Commit Manifest pointing to DynamicPPL#release-0.35 * remove LogDensityProblemsAD (#2490) * Remove LogDensityProblemsAD, part 1 * update Optimisation code to not use LogDensityProblemsAD * Fix field name change * Don't put chunksize=0 * Remove LogDensityProblemsAD dep * Improve OptimLogDensity docstring * Remove unneeded model argument to _optimize * Fix more tests * Remove essential/ad from the list of CI groups * Fix HMC function * more test fixes (#2491) * Remove LogDensityProblemsAD, part 1 * update Optimisation code to not use LogDensityProblemsAD * Fix field name change * Don't put chunksize=0 * Remove LogDensityProblemsAD dep * Improve OptimLogDensity docstring * Remove unneeded model argument to _optimize * Fix more tests * Remove essential/ad from the list of CI groups * Fix HMC function * More test fixes * Remove Manifest * More fixes for DynamicPPL 0.35 (#2494) * Remove test/dynamicppl/compiler.jl * Remove old regression tests * Remove vdemo2 * Fix last test * Add HISTORY.md entry about DPPL 0.35 * Allow ESS to sample variables with different symbols * Update a TODO note --------- Co-authored-by: Penelope Yong <penelopeysm@gmail.com>
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If anyone has PRs they would like to merge into this before releasing v0.37, could you post links here? Just to keep track. @penelopeysm I think you had one or two in mind. |
* Remove `Zygote`; fix #2504 * Update test/test_utils/ad_utils.jl Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com> * Add HISTORY.md entry about removing support for Zygote --------- Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: Markus Hauru <mhauru@turing.ac.uk> Co-authored-by: Penelope Yong <penelopeysm@gmail.com> Co-authored-by: Markus Hauru <markus@mhauru.org>
5 tasks
* Regroup exports by package * Export DynamicPPL.returned and DynamicPPL.prefix * Stop exporting @logprob_str and @prob_str * Remove DynamicPPL module export * Remove DynamicPPL.LogDensityFunction re-export * Remove BernoulliLogit, drop support for Distributions < 0.25.77 * Stop blanket re-exporting Libtask and Bijectors * Manually specify AbstractMCMC exports * Format Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com> * Remove Bijectors.ordered export * Re-export LinearAlgebra.I * Replace Turing.Model -> DynamicPPL.Model * Format * Keep exporting LogDensityFunction * Add note in docs * Align Turing exports with docs API page * Fix things like `predict` on docs API page * Fix a Gibbs test * Format * Fix missing Bijectors import * Update docs/src/api.md Co-authored-by: Markus Hauru <markus@mhauru.org> * Update docs/src/api.md Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com> * Clean up broken docs links, remove unneeded deps * Format * Add changelog entry for exports * Clean up exports in essential/Essential * Apply suggestions from code review Co-authored-by: Markus Hauru <markus@mhauru.org> --------- Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: Markus Hauru <mhauru@turing.ac.uk> Co-authored-by: Markus Hauru <markus@mhauru.org>
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All the three PRs from above are now either in this one or in |
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@gdalle Turing officially uses DI now :) |
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epic! |
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Collecting breaking changes into a single PR.