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transformer_processors.py
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# coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" GLUE processors and helpers """
import logging
import os
import copy
import csv
import json
from utils import load_jsonl
from transformers.file_utils import is_tf_available
if is_tf_available():
import tensorflow as tf
logger = logging.getLogger(__name__)
class EvidenceExample(object):
def __init__(self, guid, text_a, evidences, scores, text_b=None, label=None):
self.guid = guid
self.text_a = text_a
self.text_b = text_b
self.label = label
self.evidences = evidences
self.scores = scores
def __repr__(self):
return str(self.to_json_string())
def to_dict(self):
"""Serializes this instance to a Python dictionary."""
output = copy.deepcopy(self.__dict__)
return output
def to_json_string(self):
"""Serializes this instance to a JSON string."""
return json.dumps(self.to_dict(), indent=2, sort_keys=True) + "\n"
class InputExample(object):
"""
A single training/test example for simple sequence classification.
Args:
guid: Unique id for the example.
text_a: string. The untokenized text of the first sequence. For single
sequence tasks, only this sequence must be specified.
text_b: (Optional) string. The untokenized text of the second sequence.
Only must be specified for sequence pair tasks.
label: (Optional) string. The label of the example. This should be
specified for train and dev examples, but not for test examples.
"""
def __init__(self, guid, text_a, text_b=None, label=None):
self.guid = guid
self.text_a = text_a
self.text_b = text_b
self.label = label
def __repr__(self):
return str(self.to_json_string())
def to_dict(self):
"""Serializes this instance to a Python dictionary."""
output = copy.deepcopy(self.__dict__)
return output
def to_json_string(self):
"""Serializes this instance to a JSON string."""
return json.dumps(self.to_dict(), indent=2, sort_keys=True) + "\n"
class EvidenceFeatures(object):
"""
A single set of features of data.
Args:
input_ids: Indices of input sequence tokens in the vocabulary.
attention_mask: Mask to avoid performing attention on padding token indices.
Mask values selected in ``[0, 1]``:
Usually ``1`` for tokens that are NOT MASKED, ``0`` for MASKED (padded) tokens.
token_type_ids: Segment token indices to indicate first and second portions of the inputs.
label: Label corresponding to the input
"""
def __init__(self, input_ids, attention_mask, token_type_ids, label, score):
self.input_ids = input_ids
self.attention_mask = attention_mask
self.token_type_ids = token_type_ids
self.label = label
self.score = score
def __repr__(self):
return str(self.to_json_string())
def to_dict(self):
"""Serializes this instance to a Python dictionary."""
output = copy.deepcopy(self.__dict__)
return output
def to_json_string(self):
"""Serializes this instance to a JSON string."""
return json.dumps(self.to_dict(), indent=2, sort_keys=True) + "\n"
class InputFeatures(object):
"""
A single set of features of data.
Args:
input_ids: Indices of input sequence tokens in the vocabulary.
attention_mask: Mask to avoid performing attention on padding token indices.
Mask values selected in ``[0, 1]``:
Usually ``1`` for tokens that are NOT MASKED, ``0`` for MASKED (padded) tokens.
token_type_ids: Segment token indices to indicate first and second portions of the inputs.
label: Label corresponding to the input
"""
def __init__(self, input_ids, attention_mask, token_type_ids, label):
self.input_ids = input_ids
self.attention_mask = attention_mask
self.token_type_ids = token_type_ids
self.label = label
def __repr__(self):
return str(self.to_json_string())
def to_dict(self):
"""Serializes this instance to a Python dictionary."""
output = copy.deepcopy(self.__dict__)
return output
def to_json_string(self):
"""Serializes this instance to a JSON string."""
return json.dumps(self.to_dict(), indent=2, sort_keys=True) + "\n"
class DataProcessor(object):
"""Base class for data converters for sequence classification data sets."""
def get_example_from_tensor_dict(self, tensor_dict):
"""Gets an example from a dict with tensorflow tensors
Args:
tensor_dict: Keys and values should match the corresponding Glue
tensorflow_dataset examples.
"""
raise NotImplementedError()
def get_train_examples(self, data_dir):
"""Gets a collection of `InputExample`s for the train set."""
raise NotImplementedError()
def get_dev_examples(self, data_dir):
"""Gets a collection of `InputExample`s for the dev set."""
raise NotImplementedError()
def get_labels(self):
"""Gets the list of labels for this data set."""
raise NotImplementedError()
@classmethod
def _read_tsv(cls, input_file, quotechar=None):
"""Reads a tab separated value file."""
with open(input_file, "r", encoding="utf-8-sig") as f:
reader = csv.reader(f, delimiter="\t", quotechar=quotechar)
lines = []
for line in reader:
lines.append(line)
return lines
def news_convert_example_evidence_to_features(
examples,
all_evidences,
tokenizer,
max_length=512,
task=None,
label_list=None,
output_mode=None,
pad_on_left=False,
pad_token=0,
pad_token_segment_id=0,
mask_padding_with_zero=True,
):
"""
Loads a data file into a list of ``InputFeatures``
Args:
examples: List of ``InputExamples`` or ``tf.data.Dataset`` containing the examples.
tokenizer: Instance of a tokenizer that will tokenize the examples
max_length: Maximum example length
task: HANS
label_list: List of labels. Can be obtained from the processor using the ``processor.get_labels()`` method
output_mode: String indicating the output mode. Either ``regression`` or ``classification``
pad_on_left: If set to ``True``, the examples will be padded on the left rather than on the right (default)
pad_token: Padding token
pad_token_segment_id: The segment ID for the padding token (It is usually 0, but can vary such as for XLNet where it is 4)
mask_padding_with_zero: If set to ``True``, the attention mask will be filled by ``1`` for actual values
and by ``0`` for padded values. If set to ``False``, inverts it (``1`` for padded values, ``0`` for
actual values)
Returns:
If the ``examples`` input is a ``tf.data.Dataset``, will return a ``tf.data.Dataset``
containing the task-specific features. If the input is a list of ``InputExamples``, will return
a list of task-specific ``InputFeatures`` which can be fed to the model.
"""
is_tf_dataset = False
if is_tf_available() and isinstance(examples, tf.data.Dataset):
is_tf_dataset = True
if task is not None:
processor = glue_processors[task]()
if label_list is None:
label_list = processor.get_labels()
logger.info("Using label list %s for task %s" % (label_list, task))
if output_mode is None:
output_mode = glue_output_modes[task]
logger.info("Using output mode %s for task %s" % (output_mode, task))
label_map = {label: i for i, label in enumerate(label_list)}
features = []
for (ex_index, example) in enumerate(examples):
paired_evidences = all_evidences[ex_index]
# if ex_index % 10000 == 0:
# logger.info("Writing example %d" % (ex_index))
if is_tf_dataset:
example = processor.get_example_from_tensor_dict(example)
example = processor.tfds_map(example)
claim = example.text_a
assert(example.text_b is None)
for e_idx, evidence in enumerate(paired_evidences):
new_guid = example.guid + '_' + str(e_idx)
inputs = tokenizer.encode_plus(claim, evidence, add_special_tokens=True, max_length=max_length, return_token_type_ids=True, truncation=True)
input_ids, token_type_ids = inputs["input_ids"], inputs["token_type_ids"]
# The mask has 1 for real tokens and 0 for padding tokens. Only real
# tokens are attended to.
attention_mask = [1 if mask_padding_with_zero else 0] * len(input_ids)
# Zero-pad up to the sequence length.
padding_length = max_length - len(input_ids)
if pad_on_left:
input_ids = ([pad_token] * padding_length) + input_ids
attention_mask = ([0 if mask_padding_with_zero else 1] * padding_length) + attention_mask
token_type_ids = ([pad_token_segment_id] * padding_length) + token_type_ids
else:
input_ids = input_ids + ([pad_token] * padding_length)
attention_mask = attention_mask + ([0 if mask_padding_with_zero else 1] * padding_length)
token_type_ids = token_type_ids + ([pad_token_segment_id] * padding_length)
assert len(input_ids) == max_length, "Error with input length {} vs {}".format(len(input_ids), max_length)
assert len(attention_mask) == max_length, "Error with input length {} vs {}".format(
len(attention_mask), max_length
)
assert len(token_type_ids) == max_length, "Error with input length {} vs {}".format(
len(token_type_ids), max_length
)
if output_mode == "classification":
label = label_map[example.label] if example.label in label_map else 0
elif output_mode == "regression":
label = float(example.label)
else:
raise KeyError(output_mode)
# if ex_index < 10:
# logger.info("*** Example ***")
# logger.info("text_a: %s" % (claim))
# logger.info("text_b: %s" % (evidence))
# logger.info("guid: %s" % (new_guid))
# logger.info("input_ids: %s" % " ".join([str(x) for x in input_ids]))
# logger.info("attention_mask: %s" % " ".join([str(x) for x in attention_mask]))
# logger.info("token_type_ids: %s" % " ".join([str(x) for x in token_type_ids]))
# logger.info("label: %s (id = %d)" % (example.label, label))
features.append(
InputFeatures(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
label=label
)
)
if is_tf_available() and is_tf_dataset:
def gen():
for ex in features:
yield (
{
"input_ids": ex.input_ids,
"attention_mask": ex.attention_mask,
"token_type_ids": ex.token_type_ids,
},
ex.label,
)
return tf.data.Dataset.from_generator(
gen,
({"input_ids": tf.int32, "attention_mask": tf.int32, "token_type_ids": tf.int32}, tf.int64),
(
{
"input_ids": tf.TensorShape([None]),
"attention_mask": tf.TensorShape([None]),
"token_type_ids": tf.TensorShape([None]),
},
tf.TensorShape([]),
),
)
return features
def news_convert_examples_to_features(
examples,
tokenizer,
max_length=512,
task=None,
label_list=None,
output_mode=None,
pad_on_left=False,
pad_token=0,
pad_token_segment_id=0,
mask_padding_with_zero=True,
):
"""
Loads a data file into a list of ``InputFeatures``
Args:
examples: List of ``InputExamples`` or ``tf.data.Dataset`` containing the examples.
tokenizer: Instance of a tokenizer that will tokenize the examples
max_length: Maximum example length
task: HANS
label_list: List of labels. Can be obtained from the processor using the ``processor.get_labels()`` method
output_mode: String indicating the output mode. Either ``regression`` or ``classification``
pad_on_left: If set to ``True``, the examples will be padded on the left rather than on the right (default)
pad_token: Padding token
pad_token_segment_id: The segment ID for the padding token (It is usually 0, but can vary such as for XLNet where it is 4)
mask_padding_with_zero: If set to ``True``, the attention mask will be filled by ``1`` for actual values
and by ``0`` for padded values. If set to ``False``, inverts it (``1`` for padded values, ``0`` for
actual values)
Returns:
If the ``examples`` input is a ``tf.data.Dataset``, will return a ``tf.data.Dataset``
containing the task-specific features. If the input is a list of ``InputExamples``, will return
a list of task-specific ``InputFeatures`` which can be fed to the model.
"""
is_tf_dataset = False
if is_tf_available() and isinstance(examples, tf.data.Dataset):
is_tf_dataset = True
if task is not None:
processor = glue_processors[task]()
if label_list is None:
label_list = processor.get_labels()
logger.info("Using label list %s for task %s" % (label_list, task))
if output_mode is None:
output_mode = glue_output_modes[task]
logger.info("Using output mode %s for task %s" % (output_mode, task))
label_map = {label: i for i, label in enumerate(label_list)}
features = []
for (ex_index, example) in enumerate(examples):
if ex_index % 10000 == 0:
logger.info("Writing example %d" % (ex_index))
if is_tf_dataset:
example = processor.get_example_from_tensor_dict(example)
example = processor.tfds_map(example)
inputs = tokenizer.encode_plus(example.text_a, example.text_b, add_special_tokens=True, max_length=max_length, truncation=True, return_token_type_ids=True)
input_ids, token_type_ids = inputs["input_ids"], inputs["token_type_ids"]
# The mask has 1 for real tokens and 0 for padding tokens. Only real
# tokens are attended to.
attention_mask = [1 if mask_padding_with_zero else 0] * len(input_ids)
# Zero-pad up to the sequence length.
padding_length = max_length - len(input_ids)
if pad_on_left:
input_ids = ([pad_token] * padding_length) + input_ids
attention_mask = ([0 if mask_padding_with_zero else 1] * padding_length) + attention_mask
token_type_ids = ([pad_token_segment_id] * padding_length) + token_type_ids
else:
input_ids = input_ids + ([pad_token] * padding_length)
attention_mask = attention_mask + ([0 if mask_padding_with_zero else 1] * padding_length)
token_type_ids = token_type_ids + ([pad_token_segment_id] * padding_length)
assert len(input_ids) == max_length, "Error with input length {} vs {}".format(len(input_ids), max_length)
assert len(attention_mask) == max_length, "Error with input length {} vs {}".format(
len(attention_mask), max_length
)
assert len(token_type_ids) == max_length, "Error with input length {} vs {}".format(
len(token_type_ids), max_length
)
if output_mode == "classification":
label = label_map[example.label] if example.label in label_map else 0
elif output_mode == "regression":
label = float(example.label)
else:
raise KeyError(output_mode)
if ex_index < 10:
logger.info("*** Example ***")
logger.info("text_a: %s" % (example.text_a))
logger.info("text_b: %s" % (example.text_b))
logger.info("guid: %s" % (example.guid))
logger.info("input_ids: %s" % " ".join([str(x) for x in input_ids]))
logger.info("attention_mask: %s" % " ".join([str(x) for x in attention_mask]))
logger.info("token_type_ids: %s" % " ".join([str(x) for x in token_type_ids]))
logger.info("label: %s (id = %d)" % (example.label, label))
features.append(
InputFeatures(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
label=label
)
)
if is_tf_available() and is_tf_dataset:
def gen():
for ex in features:
yield (
{
"input_ids": ex.input_ids,
"attention_mask": ex.attention_mask,
"token_type_ids": ex.token_type_ids,
},
ex.label,
)
return tf.data.Dataset.from_generator(
gen,
({"input_ids": tf.int32, "attention_mask": tf.int32, "token_type_ids": tf.int32}, tf.int64),
(
{
"input_ids": tf.TensorShape([None]),
"attention_mask": tf.TensorShape([None]),
"token_type_ids": tf.TensorShape([None]),
},
tf.TensorShape([]),
),
)
return features
def newsevidence_convert_examples_to_features(
examples,
tokenizer,
max_length=512,
task=None,
label_list=None,
output_mode=None,
pad_on_left=False,
pad_token=0,
pad_token_segment_id=0,
mask_padding_with_zero=True,
):
"""
Loads a data file into a list of ``InputFeatures``
Args:
examples: List of ``InputExamples`` or ``tf.data.Dataset`` containing the examples.
tokenizer: Instance of a tokenizer that will tokenize the examples
max_length: Maximum example length
task: HANS
label_list: List of labels. Can be obtained from the processor using the ``processor.get_labels()`` method
output_mode: String indicating the output mode. Either ``regression`` or ``classification``
pad_on_left: If set to ``True``, the examples will be padded on the left rather than on the right (default)
pad_token: Padding token
pad_token_segment_id: The segment ID for the padding token (It is usually 0, but can vary such as for XLNet where it is 4)
mask_padding_with_zero: If set to ``True``, the attention mask will be filled by ``1`` for actual values
and by ``0`` for padded values. If set to ``False``, inverts it (``1`` for padded values, ``0`` for
actual values)
Returns:
If the ``examples`` input is a ``tf.data.Dataset``, will return a ``tf.data.Dataset``
containing the task-specific features. If the input is a list of ``InputExamples``, will return
a list of task-specific ``InputFeatures`` which can be fed to the model.
"""
is_tf_dataset = False
if is_tf_available() and isinstance(examples, tf.data.Dataset):
is_tf_dataset = True
if task is not None:
processor = glue_processors[task]()
if label_list is None:
label_list = processor.get_labels()
logger.info("Using label list %s for task %s" % (label_list, task))
if output_mode is None:
output_mode = glue_output_modes[task]
logger.info("Using output mode %s for task %s" % (output_mode, task))
label_map = {label: i for i, label in enumerate(label_list)}
features = []
for (ex_index, example) in enumerate(examples):
if ex_index % 10000 == 0:
logger.info("Writing example %d" % (ex_index))
if is_tf_dataset:
example = processor.get_example_from_tensor_dict(example)
example = processor.tfds_map(example)
for e_idx, e in enumerate(example.evidences):
inputs = tokenizer.encode_plus(example.text_a, e, add_special_tokens=True, max_length=max_length, return_token_type_ids=True, truncation=True)
input_ids, token_type_ids = inputs["input_ids"], inputs["token_type_ids"]
# The mask has 1 for real tokens and 0 for padding tokens. Only real
# tokens are attended to.
attention_mask = [1 if mask_padding_with_zero else 0] * len(input_ids)
# Zero-pad up to the sequence length.
padding_length = max_length - len(input_ids)
if pad_on_left:
input_ids = ([pad_token] * padding_length) + input_ids
attention_mask = ([0 if mask_padding_with_zero else 1] * padding_length) + attention_mask
token_type_ids = ([pad_token_segment_id] * padding_length) + token_type_ids
else:
input_ids = input_ids + ([pad_token] * padding_length)
attention_mask = attention_mask + ([0 if mask_padding_with_zero else 1] * padding_length)
token_type_ids = token_type_ids + ([pad_token_segment_id] * padding_length)
assert len(input_ids) == max_length, "Error with input length {} vs {}".format(len(input_ids), max_length)
assert len(attention_mask) == max_length, "Error with input length {} vs {}".format(
len(attention_mask), max_length
)
assert len(token_type_ids) == max_length, "Error with input length {} vs {}".format(
len(token_type_ids), max_length
)
score = float(example.scores[e_idx])
if output_mode == "classification":
label = label_map[example.label] if example.label in label_map else 0
elif output_mode == "regression":
label = float(example.label)
else:
raise KeyError(output_mode)
if ex_index < 10:
logger.info("*** Example ***")
logger.info("text_a: %s" % (example.text_a))
logger.info("text_b: %s" % (example.text_b))
logger.info("guid: %s" % (example.guid))
logger.info("input_ids: %s" % " ".join([str(x) for x in input_ids]))
logger.info("attention_mask: %s" % " ".join([str(x) for x in attention_mask]))
logger.info("token_type_ids: %s" % " ".join([str(x) for x in token_type_ids]))
logger.info("label: %s (id = %d)" % (example.label, label))
features.append(
EvidenceFeatures(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
label=label,
score=score
)
)
if is_tf_available() and is_tf_dataset:
def gen():
for ex in features:
yield (
{
"input_ids": ex.input_ids,
"attention_mask": ex.attention_mask,
"token_type_ids": ex.token_type_ids,
},
ex.label,
)
return tf.data.Dataset.from_generator(
gen,
({"input_ids": tf.int32, "attention_mask": tf.int32, "token_type_ids": tf.int32}, tf.int64),
(
{
"input_ids": tf.TensorShape([None]),
"attention_mask": tf.TensorShape([None]),
"token_type_ids": tf.TensorShape([None]),
},
tf.TensorShape([]),
),
)
return features
class NewsEvidenceProcessor(DataProcessor):
def __init__(self, input_key, label_key):
super(NewsEvidenceProcessor, self).__init__()
self.input_key = input_key
self.label_key = label_key
def get_example_from_tensor_dict(self, tensor_dict):
"""See base class."""
return InputExample(
tensor_dict["idx"].numpy(),
tensor_dict["premise"].numpy().decode("utf-8"),
tensor_dict["hypothesis"].numpy().decode("utf-8"),
str(tensor_dict["label"].numpy()),
)
def get_train_examples(self, data_dir):
"""See base class."""
return self._create_examples(load_jsonl(os.path.join(data_dir, "train.jsonl")), "train")
def get_dev_examples(self, data_dir):
"""See base class."""
return self._create_examples(load_jsonl(os.path.join(data_dir, "dev.jsonl")), "dev")
def get_labels(self):
"""See base class."""
return ["0", "1"]
def _create_examples(self, raw_examples, set_type):
"""Creates examples for the training and dev sets."""
examples = []
for (i, example) in enumerate(raw_examples):
if 'link' in example.keys():
ex_id = example['link']
elif 'id' in example.keys():
ex_id = example['id']
elif 'origin_line_number' in example.keys():
ex_id = "%s-%s" % (example['origin_line_number'], i)
else:
ex_id = i
guid = "%s-%s" % (set_type, ex_id)
text_a = example[self.input_key]
# For lucene virification
text_a = ' '.join(text_a.strip().split())
if len(text_a) == 0:
continue
label = example[self.label_key]
if type(label) is not str:
label = str(label)
try:
evidences = [' '.join(e.strip().split()) if e is not None else None for e in example['evidences']]
except:
print(example)
exit()
scores = example['scores']
examples.append(EvidenceExample(guid=guid, text_a=text_a, evidences=evidences, scores=scores, text_b=None, label=label))
return examples
class NewsProcessor(DataProcessor):
"""Processor for the NELA data set."""
def __init__(self, input_key, label_key):
super(NewsProcessor, self).__init__()
self.input_key = input_key
self.label_key = label_key
def get_example_from_tensor_dict(self, tensor_dict):
"""See base class."""
return InputExample(
tensor_dict["idx"].numpy(),
tensor_dict["premise"].numpy().decode("utf-8"),
tensor_dict["hypothesis"].numpy().decode("utf-8"),
str(tensor_dict["label"].numpy()),
)
def get_train_examples(self, data_dir):
"""See base class."""
return self._create_examples(load_jsonl(os.path.join(data_dir, "train.jsonl")), "train")
def get_dev_examples(self, data_dir):
"""See base class."""
return self._create_examples(load_jsonl(os.path.join(data_dir, "dev.jsonl")), "dev")
def get_labels(self):
"""See base class."""
return ["0", "1"]
def _create_examples(self, raw_examples, set_type):
"""Creates examples for the training and dev sets."""
examples = []
for (i, example) in enumerate(raw_examples):
if 'link' in example.keys():
ex_id = example['link']
elif 'id' in example.keys():
ex_id = example['id']
elif 'origin_line_number' in example.keys():
ex_id = "%s-%s" % (example['origin_line_number'], i)
else:
ex_id = i
guid = "%s-%s" % (set_type, ex_id)
text_a = example[self.input_key]
# For lucene virification
text_a = ' '.join(text_a.strip().split())
if len(text_a) == 0:
continue
label = example[self.label_key]
if type(label) is not str:
label = str(label)
examples.append(InputExample(guid=guid, text_a=text_a, text_b=None, label=label))
return examples
class News3Processor(NewsProcessor):
"""Processor for the NELA data set."""
def get_labels(self):
"""See base class."""
return ["0", "1", "2"]
glue_tasks_num_labels = {
"news": 2,
"news3": 3,
"newsevidence": 2
}
glue_processors = {
"news": NewsProcessor,
"news3": News3Processor,
"newsevidence": NewsEvidenceProcessor,
}
glue_output_modes = {
"news": "classification",
"news3": "classification",
"newsevidence": "classification",
}