• Extended test harness
• Improved database construction and matching
• Validated against KrakenUniq (almost exact same results on suitable genomes)
• Added std. dev. for contig len
• Added goal fasta2fastq

• Added error measures in CSV reports
• Additional configuration options regarding classification errors in reads
• Performance optimizations
• Bug Fixes

• Bug fixes and improved testing
• Improved goal structure
• More configuation options for database generation (in particular to contol DB size)
• Stream-lined CSV file output

Improved Streaming for API-based use. Minor bug fixes.

Enabled database generation for RNA.

Minor bug fix (regarding thread safety during DB generation).

Maintenance and minor bug fixes.

• Bug fix for total reads and total kmers when analyzing multiple fastqs.
• Added glob pattern for fastq file names in fastq mappings.

• Improved processing of fastq files.
• Enabled processing of line breaks in fastq files in fields 2 and 4.
• Added API goal for database downloads.
• Some bug fixes and performance optimizations.

• Minor bug fixes
• Minor improvements for server-side integration and use