Mitogenomics reveals two cryptic species in Ciona intestinalis
- PMID: 17640763
- DOI: 10.1016/j.tig.2007.07.001
Mitogenomics reveals two cryptic species in Ciona intestinalis
Abstract
Individual mitochondrial genes or genomic features are commonly used as phylogenetic markers at many taxonomic levels. We used a mitogenomics approach to demonstrate the existence of two cryptic species in the ascidian Ciona intestinalis, a model chordate whose status as a single species has recently been questioned. Comprehensive comparative analysis of the mitochondrial genome of the two cryptic species revealed significant differences in gene order, size and number of noncoding regions, compositional features and divergence of protein-coding genes.
Similar articles
-
Loss of ancestral genes in the genomic evolution of Ciona intestinalis.Evol Dev. 2005 May-Jun;7(3):196-200. doi: 10.1111/j.1525-142X.2005.05022.x. Evol Dev. 2005. PMID: 15876192
-
Unraveling genomic regulatory networks in the simple chordate, Ciona intestinalis.Genome Res. 2005 Dec;15(12):1668-74. doi: 10.1101/gr.3768905. Genome Res. 2005. PMID: 16339364 Review.
-
Genomic overview of mRNA 5'-leader trans-splicing in the ascidian Ciona intestinalis.Nucleic Acids Res. 2006 Jul 5;34(11):3378-88. doi: 10.1093/nar/gkl418. Print 2006. Nucleic Acids Res. 2006. PMID: 16822859 Free PMC article.
-
Crossing the species barrier: genomic hotspots of introgression between two highly divergent Ciona intestinalis species.Mol Biol Evol. 2013 Jul;30(7):1574-87. doi: 10.1093/molbev/mst066. Epub 2013 Apr 5. Mol Biol Evol. 2013. PMID: 23564941
-
Initial stage of genetic mapping in Ciona intestinalis.Dev Dyn. 2007 Jul;236(7):1768-81. doi: 10.1002/dvdy.21163. Dev Dyn. 2007. PMID: 17471502 Review.
Cited by
-
Chaperones, Canalization, and Evolution of Animal Forms.Int J Mol Sci. 2018 Oct 4;19(10):3029. doi: 10.3390/ijms19103029. Int J Mol Sci. 2018. PMID: 30287767 Free PMC article. Review.
-
Coupling molecular data and experimental crosses sheds light about species delineation: a case study with the genus Ciona.Sci Rep. 2018 Jan 24;8(1):1480. doi: 10.1038/s41598-018-19811-2. Sci Rep. 2018. PMID: 29367599 Free PMC article.
-
Tunicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny.BMC Genomics. 2009 Nov 17;10:534. doi: 10.1186/1471-2164-10-534. BMC Genomics. 2009. PMID: 19922605 Free PMC article.
-
The mitochondrial genome of Phallusia mammillata and Phallusia fumigata (Tunicata, Ascidiacea): high genome plasticity at intra-genus level.BMC Evol Biol. 2007 Aug 31;7:155. doi: 10.1186/1471-2148-7-155. BMC Evol Biol. 2007. PMID: 17764550 Free PMC article.
-
Full Mitochondrial Genomes Reveal Species Differences between the Venerid Clams Ruditapes philippinarum and R. variegatus.Genes (Basel). 2022 Nov 19;13(11):2157. doi: 10.3390/genes13112157. Genes (Basel). 2022. PMID: 36421831 Free PMC article.