Several transition states from (4)C(1) to skew conformations of beta-D-glucopyranose
- PMID: 19766991
- DOI: 10.1016/j.carres.2009.08.020
Several transition states from (4)C(1) to skew conformations of beta-D-glucopyranose
Abstract
The interconversion pathways in the ring distortion of beta-D-glucopyranose were investigated using density functional calculations. We examined the energies of several conformers of beta-D-glucopyranose and tried to obtain the transition-state conformation and determine the pathway between a (4)C(1) chair and some distorted ring conformers. The results showed that two E(3)/(2)H(3) conformations and one E(3)/(4)H(3) conformation were transition states in such ring puckering. The transition state with the lowest energy conformation is the E(3)/(2)H(3) ring conformation with the side-chain conformation of r-ggG(+). Intrinsic reaction coordinate calculations indicated that the E(3)/(2)H(3) conformation with the lowest conformational energy is a transition state of the ring interconversion path between the conformations of (4)C(1) and (2)S(O)/B(3,O). The energy barrier of this interconversion was 6.13 kcal/mol. As far as we know, this is the first example of finding pathways for an interconversion of glucopyranose ring puckering at the level of a quantum chemical calculation.
Similar articles
-
An investigation of the pyranose ring interconversion path of alpha-L-idose calculated using density functional theory.Carbohydr Res. 2006 Nov 6;341(15):2565-74. doi: 10.1016/j.carres.2006.07.015. Epub 2006 Aug 22. Carbohydr Res. 2006. PMID: 16920091
-
Conformational pathways of saturated six-membered rings. A static and dynamical density functional study.J Phys Chem A. 2005 Sep 15;109(36):8096-105. doi: 10.1021/jp052197t. J Phys Chem A. 2005. PMID: 16834195
-
B3LYP/6-311++G** study of alpha- and beta-D-glucopyranose and 1,5-anhydro-D-glucitol: 4C1 and 1C4 chairs, (3,O)B and B(3,O) boats, and skew-boat conformations.Carbohydr Res. 2004 Feb 25;339(3):537-51. doi: 10.1016/j.carres.2003.10.014. Carbohydr Res. 2004. PMID: 15013391
-
DFT study of alpha- and beta-D-mannopyranose at the B3LYP/6-311++G** level.Carbohydr Res. 2005 Feb 28;340(3):459-68. doi: 10.1016/j.carres.2004.12.010. Carbohydr Res. 2005. PMID: 15680602
-
DFT study of alpha- and beta-D-allopyranose at the B3LYP/6-311++G ** level of theory.Carbohydr Res. 2007 Feb 5;342(2):196-216. doi: 10.1016/j.carres.2006.12.006. Epub 2006 Dec 15. Carbohydr Res. 2007. PMID: 17204259
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Research Materials