WormLabCaltech

Repositories

• med-cafe

  A project to study a short allelic series of mediator mutants using transcriptomic phenotypes.
  Jupyter Notebook MIT 0 0 0 0 Updated Aug 11, 2020

• ctd_paper

  Forked from pquinter/ctd_paper
  Python 2 0 0 0 Updated Oct 18, 2019

• alaska

  Automated and friendly RNA-seq analysis (deprecated)

  python docker automation quality-control rna-seq pipeline analysis
  Python MIT 0 5 8 0 Updated May 21, 2019

• expression-plotter

  Automated data analysis and plot generator.
  Jupyter Notebook MIT 0 1 0 0 Updated Oct 27, 2018

• Angeles_Leighton_2016

  bioinformatics rna-seq celegans
  Jupyter Notebook MIT 0 2 0 0 Updated Jun 21, 2018

• mprsq

  Massively Parallel RNA-seq Project

  bioinformatics rna-seq genetics transcriptome
  Jupyter Notebook MIT 1 2 0 0 Updated May 16, 2018

• RNA_seq_template

  A template for non-single-worm RNA-seq projects
  Python MIT 0 0 0 0 Updated Jan 23, 2018

• WormLabCaltech.github.io

  Forked from barryclark/jekyll-now

  Build a Jekyll blog in minutes, without touching the command line.
  CSS MIT 29,130 0 0 0 Updated Nov 25, 2017

• dauerRNAseq

  Forked from LeeShioRamen/dauerRNAseq
  R MIT 1 1 0 0 Updated Nov 10, 2017

• clustering_on_transcript_compatibility_counts

  Forked from govinda-kamath/clustering_on_transcript_compatibility_counts

  Clustering cells from single cell RNA seq assays
  Jupyter Notebook MIT 19 0 0 0 Updated Jul 14, 2017

• ResidentWorm

  Compares worm occupancy between different regions of interest.
  Python 0 0 4 0 Updated May 4, 2017

• DigiTracker_Suite

  The Caltech Worm Tracker (Sternberg Lab)
  C++ 0 0 0 0 Updated Mar 31, 2017

• cGAL

  Everything cGAL, the GAL4-UAS system for C. elegans
  Jupyter Notebook 0 0 0 0 Updated Mar 31, 2017

• PQpython_utils

  Forked from pquinter/PQpython_utils
  Python 2 0 0 0 Updated Mar 12, 2017

• GSATemplate

  Forked from kbroman/GSATemplate

  LaTeX templates for Genetics and G3 manuscripts, from Overleaf
  TeX 2 0 0 0 Updated Sep 8, 2016

• QuinteroSternberg2016

  Forked from pquinter/QuinteroSternberg2016
  Python 2 0 0 0 Updated May 3, 2016

• pycelegans-2.0

  Forked from david-biron/pycelegans-2.0

  PyCelegans code and examples, generative statistical algorithm for complex postures
  Mathematica 1 0 0 0 Updated Sep 1, 2015

• pycelegans-1.0

  Forked from david-biron/pycelegans-1.0

  Parallel image processing code that identifies C. elegans in images
  Python 2 0 0 0 Updated Aug 26, 2015