graph-neural-networks
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Apr 17, 2020 - C++
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Some algorithms supported in StellarGraph via demos aren't listed in documentation on readthedocs
Describe the bug
In StellarGraph, some algorithms are in demo notebooks or scripts, without being listed in our main documentation. This could mean that a user reading our docs thinks they're not supported in StellarGraph.
I noticed line 139 in "lib/utils.py" should be modified
from "model = gensim.models.Word2Vec(Sentences(self.documents), size)"
to "model = gensim.models.Word2Vec(sentences=Sentences(self.documents), size=size)"
I guess the parameter list of the Word2Vec constructor changed...
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In LINE's code, there might be a minor error in negative sampling part (if I understand it correctly).
https://github.com/THUDM/cogdl/blob/a69a969020b8aa41cfcd8ac54511984bc5b32d62/cogdl/models/emb/line.py#L133-L137
If index j for negative samples start at 1, then the number of negative sample should be self.negative-1. For example, if you set self.negative=5, 0 is not the negative sample (sin
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import torch
from torch_cluster import graclus_cluster
row = torch.tensor([0, 1, 1, 2])
col = torch.tensor([1, 0, 2, 1])
weight = torch.Tensor([1, 1, 1, 1]) # Optional edge weights.
cluster = graclus_cluster(row, col, weight)
print(cluster)
tensor([0, 0, 1])
The result seems to be 'tensor([0, 0, 2])' in my mac
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I viewed the whole code and found that the code only use toy dummy data to train model. So I don't really understand how you use those data to train GCN model. Can you supply the code or instructions about how to use real-world data to train model?
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The documentation about edge orientation is inconsistent. In the Creating Message Passing Networks tutorial, the main expression says that e𝑖,𝑗 denotes (optional) edge features from node 𝑖 to node 𝑗., the attached expression also suggests it. However, in documentation to MessagePassing.message(), the documentation says Constructs messages from node 𝑗 to node 𝑖 (this is actually true).
I