Here are
36 public repositories
matching this topic...
Multivariate Imputation by Chained Equations
FlowKit is an intuitive Python toolkit for flow cytometry analysis and visualization, with full support for the GatingML 2.0 standard and limited support for FlowJo 10 workspace files.
Updated
Oct 15, 2021
Python
A Python library for reading and writing Flow Cytometry Standard (FCS) files
Updated
Sep 8, 2021
Python
Fast and accurate cross-correlation over arbitrary time lags. Moved to:
Updated
Aug 14, 2018
Python
Fast and accurate cross-correlation over arbitrary time lags.
Updated
Sep 5, 2020
Python
Javascript / node.js code to read FCS flow cytometry data
Updated
Jan 17, 2020
JavaScript
Read Flow Cytometry Standard (FCS) files in Julia
Updated
Nov 3, 2020
Julia
FlowUtils is a Python package containing various utility functions related to flow cytometry analysis, primarily focused on compensation and transformation tasks commonly used within the flow community.
Updated
Sep 15, 2021
Python
Pipeline for analysing and visualising CyTOF datasets, with a focus on PTM signalling networks.
Updated
Sep 8, 2021
Python
Django-based Repository for Flow Cytometry Data
Updated
May 1, 2019
JavaScript
In-browser utility for validating FCS file specification compliance
Updated
May 4, 2021
JavaScript
A Python library for high level interaction with flow cytometry data (FCS files)
Updated
Feb 1, 2019
Python
R Script for reading CyTOF or flow cytometry data (FCS) and generating plots like Cytobank
Created to help backup data from a CyTOF system
Updated
Aug 27, 2019
Batchfile
REST endpoints for CLARIAH Federated Content Search
Updated
Aug 11, 2021
Java
Retrieve index sorted data and visually explore .fcs data files.
Updated
Jul 27, 2019
Python
Optical crosstalk in SPAD arrays for high-throughput smFRET
Updated
Oct 31, 2017
Jupyter Notebook
Anonymization app for project Phenotyping Lymphoma with an Artificial Intelligence Toolbox (PLAIT) based on R shiny; access website and AI via eduroam
Counts index files and folders produced by the BD Influx
Updated
Sep 6, 2019
Python
Plots log histograms of FCS files like CyTOF's PlotViewer program
simulation of 2D diffusion on a grid to understand fluorescence correlation spectroscopy (FCS)
Script with macros various macros like PIPs and modified axis to allow right pedal to accelerate and left pedal to deaccelerate/reverse
CURRENTLY NOT IN MAINTENANCE - Unnoficial Python library to do requests on FCS API. See more on
https://fcsapi.com/
Updated
May 17, 2020
Python
Flow cytometry visualization demo using Jupyter, Plotly, and fcsparser
Updated
Nov 5, 2018
Jupyter Notebook
Plots the MDS (Multi-dimensional scaling) of 3 or more FCS files.
Web frontend for FCSP MOL file encoder
Updated
Aug 21, 2017
HTML
A collection of visualization examples for Flow Cytometry Data
Updated
Nov 10, 2017
JavaScript
R Script to plot the average event rate in flow or mass cytometry (FCS) files
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