NIPY developers

Repositories

• nipy.github.com

  Main website for the Neuroimaging in Python community
  HTML 11 7 6 1 Updated May 18, 2021

• heudiconv

  A flexible DICOM converter for organizing brain imaging data into structured directory layouts
  Python 84 142 116 8 Updated May 14, 2021

• nibabel

  Python package to access a cacophony of neuro-imaging file formats
  Python 223 404 91 (3 issues need help) 27 Updated May 14, 2021

• nipype

  Workflows and interfaces for neuroimaging packages

  python data-science big-data workflow-engine dataflow neuroimaging dataflow-programming
  Python 465 563 310 29 Updated May 6, 2021

• napari-nibabel

  A napari plugin that uses nibabel to display medical images
  Python BSD-3-Clause 3 0 2 0 Updated May 3, 2021

• niwidgets

  Neuroimaging widgets for jupyter notebooks
  Jupyter Notebook 33 65 16 (1 issue needs help) 6 Updated Apr 20, 2021

• mindboggle

  Automated anatomical brain label/shape analysis software (+ website)

  python image-processing python3 image-analysis surfaces shape-descriptor brain-imaging
  Python 47 115 18 1 Updated Apr 8, 2021

• nipy

  Neuroimaging in Python FMRI analysis package
  Python BSD-3-Clause 127 296 37 6 Updated Mar 30, 2021

• nitime

  Timeseries analysis for neuroscience data
  Python 72 190 17 0 Updated Dec 20, 2020

• PySurfer

  Cortical neuroimaging visualization in Python
  Python BSD-3-Clause 90 171 14 2 Updated Nov 11, 2020

• dmriprep

  MOVED TO https://github.com/nipreps/dmriprep
  Python 11 16 33 10 Updated Aug 28, 2020

• nilabels

  Tools to automate simple manipulations and measurements of medical images and segmentations in nifti format.
  Python MIT 1 18 0 0 Updated Jul 6, 2019

• mindboggle-assets

  Media assets for the mindboggle website
  0 0 0 0 Updated Jun 9, 2019

• workshops

  Brain imaging workshops

  python reproducible-research neuroimaging
  Jupyter Notebook 31 13 0 4 Updated Apr 27, 2019

• nipy-artwork

  Fliers, images, etc
  TeX 15 9 0 0 Updated Jan 27, 2019

• brainx

  Tools for analysis of brain imaging-derived networks, based on NetworkX
  Python 30 33 2 4 Updated Jan 27, 2019

• nibotmi

  NIPY BuildBot Master Instance
  Python BSD-2-Clause 9 11 6 1 Updated Feb 17, 2018

• quickshear

  Quickshear Defacing for Neuroimages
  Python BSD-3-Clause 5 6 0 0 Updated Jun 4, 2017

• nireg

  Brain image registration package
  Python 13 27 4 0 Updated Jun 21, 2016

• mindboggle-data
  0 0 0 0 Updated May 4, 2016

• data-packages

  Serving nipy data packages via Github pages
  Python 0 0 0 0 Updated Oct 3, 2015

• blog
  Makefile 1 1 0 0 Updated Jan 31, 2015

• PyLocator

  Localization of EEG-electrodes from MRI-recordings
  Python 4 6 1 0 Updated Jan 15, 2014

• nibotme-logs

  NIPY BuildBot Master Instance (buildbot logs)
  0 0 0 0 Updated Oct 27, 2013

• nipy-labs

  Work-in-progress add-ons for nipy (require lapack)
  C 2 2 0 0 Updated Sep 30, 2013

• nipyco

  Nipy community web pages
  Python 3 2 0 0 Updated May 23, 2013

• nipy-suite

  Meta-project to provide a single point of getting/testing for all projects under NiPy umbrella
  Shell 2 4 0 0 Updated May 8, 2012

• nibabel-paper

  Journal manuscript for the initial publication of NiBabel
  Python 1 1 0 0 Updated Sep 19, 2011

• pbrain

  Python EEG and ECoG analysis software by John Hunter et al
  Python 21 87 0 0 Updated Mar 30, 2011

• nisext

  Shareable distutils etc utilities
  Python 1 1 0 0 Updated Jan 19, 2011