transcriptome

c-plus-plus bioinformatics rna-seq gene-expression rnaseq scrna-seq quantification transcriptome single-cell quasi-mapping salmon sailfish 10x single-cell-rna-seq selective-alignment rna-seq-quantification

simulator genome transcriptome oxford-nanopore nanopore-sequencing

classifier machine-learning analysis tool cancer tcga gene-expression methodology transcriptome pancancer

rna-seq sequencing transcriptome transcriptomics single-cell marker-genes seurat cluster-annotation cell-markers

visualization bioinformatics rna-seq r shiny transcriptome shiny-apps genome-biology

pacbio transcriptome oxford-nanopore transcript-quantification

gui r shiny reproducible-research gene-expression data-visualization bioconductor transcriptome user-friendly data-exploration transcriptomics rna-seq-analysis pathway-analysis rna-seq-data bioconductor-package functional-enrichment-analysis

r shiny reproducible-research bioconductor transcriptome user-friendly rna-seq-analysis principal-components rna-seq-data

pipeline genomics genome-annotation transcriptome

bioinformatics rna-seq nanopore genomics clustering transcriptome

bioinformatics rna-seq transcriptome transcriptome-assembly

workflow pipeline nextflow rna transcriptome rna-seq-analysis differential-expression lncrna non-coding nf-core long-non-coding

gene-sets r evolution gene-expression conservation transcriptome evolutionary-transcriptomics evo-devo studies-transcriptomes biological-processes mytai expression-profiles

bioinformatics long-read pacbio transcriptome oxford-nanopore pacbio-iso-seq

bioinformatics clustering transcriptome oxford-nanopore pacbio-iso-seq

rna-seq snakemake pipeline genome analysis transcriptome mrna molecular-biology polya-tail docker-installation genome-reference-database reference-database

transcriptome expression-character-tree expression-evolution

rna-seq chip-seq transcriptome distance-estimation character-tree-building ancestral-inference

deep-learning semi-supervised-learning imputation transcriptome single-cell

bioinformatics clustering transcriptome ccs long-reads error-correction

biology signal-processing transcriptome deconvolution

deep-learning semi-supervised-learning imputation transcriptome single-cell

tutorial transcriptome edger cage fantom

workflow diamond common-workflow-language transcriptome cwl marine transdecoder cwl-workflow cwl-descriptions phmmer cwl-description

neural-network transcriptome

gene gene-expression transcriptome refex

python paper tcga vae gtex transcriptome umap multilayer-network ukbiobank twas

rna-seq microbiome transcriptome rna-seq-analysis 16s 16s-rrna multiomics

science data-science bioinformatics pipeline genetics ngs bioinformatics-pipeline phylogenetics data-analysis orthologues phylogenomic transcriptome phylogenomics molecular-biology bioinformatics-analysis ngs-analysis taxonomic-classification phylogenomics-pipeline ngs-pipeline hybseq-data