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Bioinformatics

Bioinformatics is an interdisciplinary field that intersects with biology, computer science, mathematics and statistics. It concerns itself with the development and use of methods and software tools for collecting and analyzing biological data.

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scanpy
Yves33
Yves33 commented Nov 26, 2021

In pl.pca_loagings(), there should be an option to limit the number of points plotted (basically n_points from ranking)

Why: I recently used the AnnData/scanpy suite to perform some analysis on a low number of genes (less than 30, amplified by qRT-PCR).
As the number of features is less than 30 (30 being the default value for n_points in ranking(adata,*args,**kwargs), the loadings appear twice

Enhancement Area - Plotting 🌺 good first issue
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