deepvariant

Here are 7 public repositories matching this topic...

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

DeepVariant-on-Spark is a germline short variant calling pipeline that runs Google DeepVariant on Apache Spark at scale.

Scalable and High Performance Variant Calling on Cluster Environments

A Snakemake workflow for variant calling with DeepVariant, and optionally joint variant calling using GLnexus.

Joint variant calling with GATK4 HaplotypeCaller, Google DeepVariant 1.0.0 and Strelka2, coordinated via Snakemake.

A small repo that eases use of google's deepvariant with GWA metastudies about hypertension

Notebooks and examples for DeepVariant on Spark project.

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